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SRX1834889: The liver transcriptome of suckermouth armoured catfish (Pterygoplichthys anisitsi, Loricariidae): identification of expansions in defensome gene families
1 ILLUMINA (Illumina HiSeq 2500) run: 58.6M spots, 5.8G bases, 2.4Gb downloads

Design: Libraries were constructed using total RNA extracted from liver and the TrueSeq kit.
Submitted by: Fundacao Oswaldo Cruz
Study: Molecular biodiversity of Loricariidae fish
show Abstracthide Abstract
We study the molecular biodiversity of Loricariidae fish aiming to comprehend specific biochemical and physiological adaptations found in those species, in particular adaptations on genes coding for enzymes involved on the biotransformation of xenobiotics. Moreover, we aim to elucidate the phylogenetic relationships among these fish and provide genetic markers to be used in population genetics, phylogenetic and environmental toxicology studies.
Sample: Pterygoplichthys anisitsi
SAMN05216828 • SRS1494253 • All experiments • All runs
Library:
Instrument: Illumina HiSeq 2500
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: PolyA
Layout: SINGLE
Spot descriptor:
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Pipeline: show...hide...
ProgramVersion
Trinityr20131110
Runs: 1 run, 58.6M spots, 5.8G bases, 2.4Gb
Run# of Spots# of BasesSizePublished
SRR366432658,617,8735.8G2.4Gb2017-05-12

ID:
2619557

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